site support navigationpage contentuseful information navigation

Setting up and managing your payroll system

An efficient payroll system is essential to ensure your employees are paid on time and their salaries are correctly calculated.

This guide explains: 

An employer’s payroll responsibilities

Payroll is simply any system an employer uses to work out their employees’ salaries and make the correct deductions from their pay. An employer is obliged by law to adjust wages to account for:

Along with certain other items depending on the employee, such as: 

Deductions are worked out using complex tax tables provided by HM Revenue & Customs.

The payroll records an employer must keep

Employers are required to:

Failure to complete these tasks could result in a fine.

You can now use the internet to send tax returns to HM Revenue & Customs, and by 2010 it will be compulsory to file returns electronically. Further information is available from HM Revenue & Customs’ Electronic Business Unit.

Apply online for a HM Revenue & Customs New employers’ starter pack – www.hmrc.gov.uk

Legal issues relating to payroll

Employers must keep all payroll documentation for at least three years after the tax year to which it relates.

Payment methods

There are various methods for paying employees, including cash, cheque or by electronic transfer directly into the employee’s bank account. 

Payroll system options

Some employers prefer to outsource their payroll system using payroll service companies.

Payroll software

There are many good payroll software programs available, which can take some of the stress out of the process. Payroll software can:

Shop around for the best software for your company. Make sure the program:

Any payroll software will require an annual licence fee to be paid to keep it up to date, and also special stationery may need to be used, which could cost extra.

Payroll service companies

These companies provide fully-qualified payroll managers to administer to the needs of your business. The main advantages are:

Remember, however, that even if somebody else is running the payroll function for you, the application of the PAYE and NICS system remains your legal responsibility.

Payroll bureaux

There are several payroll bureaux that give you the control of running your own payroll system without needing to have the technical infrastructure and logistics in place. However, you’ll need comprehensive payroll knowledge, and many of these systems are driven by a coding structure that requires a certain amount of prior training.

Useful contacts

Let us help you

Apply online
Complete your online application form in less than 10 minutes.

Call us on
0800 022 4388
Lines are open 8am to 8pm Monday to Friday and 9am to 1pm Saturday.

Request further information 
(opens in a new window)
Fill in a request form to receive more information before you apply.